1.2 Host–pathogen interaction

Host–Pathogen Interaction in AquilariaThe Defense Response That Creates Agarwood

Agarwood formation is the biological outcome of a controlled conflict between the Aquilaria tree (host) and invading microorganisms (pathogens). This interaction activates one of the most sophisticated plant defense systems in the forest—resulting in the production of resin-rich secondary metabolites that define true agarwood.

1. Entry: Breach of the Tree’s Protective Barrier

Trigger Events

  • Physical injury (natural or induced)
  • Insect boring or drilling
  • Microbial or fungal entry

Once the bark and cambium are breached, microorganisms gain access to the xylem tissues, where water and nutrients flow.

 This breach does not create agarwood by itself—it initiates the defense cascade.

2. Recognition: The Tree Detects a Threat

Aquilaria cells possess pattern recognition receptors (PRRs) that detect:

  • Pathogen-associated molecular patterns (PAMPs)
    (e.g., fungal cell wall fragments)
  • Damage-associated molecular patterns (DAMPs)
    (signals from wounded plant cells)

Once detected, the tree triggers innate immune signaling, similar to an alarm system.

3. Signal Transduction: Defense Pathways Are Activated

Recognition activates internal signaling pathways involving:

  • Reactive oxygen species (ROS) bursts
  • Calcium ion (Ca²⁺) flux
  • Phytohormones such as:
    • Jasmonic acid (JA)
    • Salicylic acid (SA)
    • Ethylene (ET)

These signals instruct the tree to shift from growth to defense mode.

4. Defense Response: Resin Biosynthesis Begins

In response to the pathogen threat, Aquilaria:

  • Produces antimicrobial secondary metabolites
  • Synthesizes sesquiterpenes and chromones
  • Deposits resin in infected xylem tissues
  • Darkens and hardens the wood to isolate invasion

This resin:

  • Restricts pathogen spread
  • Blocks vascular flow to infected zones
  • Protects healthy tissues

Agarwood is essentially the tree’s biochemical armor.

5. Containment vs Collapse: The Balance That Matters

There are two possible outcomes of host–pathogen interaction:

A. Controlled Interaction (Desired Outcome)

  • Pathogen pressure is moderate
  • Defense response is sustained
  • Resin accumulates gradually
  • Tree remains alive and productive

✔ Produces high-grade agarwood

B. Uncontrolled Infection (Failure Mode)

  • Excessive pathogen load
  • Vascular collapse
  • Necrosis and tree death

✖ Produces low-grade wood or total loss

BarIno™ protocols are designed to stay within the controlled interaction zone.

6. Role of Fungi in Agarwood Defense Activation

Certain fungi (e.g., FusariumPhomopsisLasiodiplodia) act as elicitors, not destroyers.

They:

  • Stimulate defense gene expression
  • Maintain chronic, low-level stress
  • Drive long-term resin production

The goal is not to kill the fungus, but to maintain a dialogue.

7. BarIno™ Applied Host–Pathogen Management

The BarIno™ Integrated Inoculation System treats host–pathogen interaction as a managed biological process, not a random infection.

BarIno™ Control Points:

  • Timing – Only physiologically mature trees
  • Dosage – DBH-calibrated inoculation
  • Depth – Targeting xylem without vascular collapse
  • Sequencing – Activation → Induction → Amplification → Densification
  • Monitoring – Resin progression, not just infection spread

This ensures defense activation without host failure.

8. Why Agarwood Is Not “Artificial”

All agarwood—natural or induced—comes from the same defense genes, pathways, and metabolites.

The difference lies in:

  • Random vs guided pathogen exposure
  • Unmanaged vs controlled defense signaling
  • Forest chance vs plantation science

Induction does not create resin.
The tree does.

9. Training Summary

  • Injury lets microbes in
  • The tree detects danger
  • Defense signals are activated
  • Resin is produced to protect the tree
  • Proper control = good agarwood
  • Too much infection = tree death

Key BarIno™ Principle

Agarwood quality is determined not by the pathogen alone, but by how well the host’s defense response is managed.